Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1146316 bp
Thymine Count
1150010 bp
Guanine Count
1177233 bp
Cytosine Count
1195607 bp
Genome Length
4669166 bp
Protein-coding Genes
4321 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf496 family protein | DGZ25_02590 | Not Available | Negative | 470677 - 471006 | 12778.5 |
| fusc family protein | DGZ25_02595 | Not Available | Negative | 471178 - 472236 | 39957.7 |
| dna gyrase inhibitor sbmc | DGZ25_02600 | Not Available | Negative | 472435 - 472908 | 18068.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | DGZ25_02605 | Not Available | Negative | 473027 - 474193 | 43304.5 |
| exodeoxyribonuclease i | DGZ25_02610 | Not Available | Positive | 474382 - 475809 | 54516.7 |
| hypothetical protein | DGZ25_02615 | Not Available | Negative | 475852 - 476079 | 8020.55 |
| yeee/yede family protein | DGZ25_02620 | Not Available | Negative | 476093 - 477151 | 37999.6 |
| low-affinity putrescine importer plap | DGZ25_02625 | Not Available | Negative | 477330 - 478688 | 49540.5 |
| membrane protein yoei | DGZ25_02630 | Not Available | Negative | 478678 - 478740 | 2241.66 |
| lysr family transcriptional regulator | DGZ25_02635 | Not Available | Negative | 478955 - 479884 | 34189.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





