Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate lyase | DGR76_03470 | Not Available | Negative | 705693 - 706175 | 18223.6 |
| hth-type transcriptional activator alls | DGR76_03475 | Not Available | Positive | 706405 - 707331 | 34612.8 |
| trna 2-selenouridine(34) synthase mnmh | DGR76_03480 | Not Available | Positive | 707400 - 708494 | 41046.1 |
| hypothetical protein | DGR76_03490 | Not Available | Negative | 709496 - 709987 | 18460.3 |
| rhs repeat protein | DGR76_03495 | Not Available | Negative | 709968 - 711364 | 53659.7 |
| hypothetical protein | DGR76_03500 | Not Available | Negative | 711889 - 712071 | 7109.7 |
| 3-mercaptopyruvate sulfurtransferase | DGR76_03505 | Not Available | Negative | 712546 - 713391 | 30841.6 |
| alpha-2-macroglobulin family protein | DGR76_03510 | Not Available | Positive | 713598 - 718559 | 181560.0 |
| penicillin-binding protein 1c | DGR76_03515 | Not Available | Positive | 718560 - 720872 | 85168.8 |
| dimethyl sulfoxide reductase subunit a | DGR76_03520 | Not Available | Positive | 721037 - 723418 | 88399.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




