Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | DGR76_03025 | Not Available | Negative | 627023 - 627175 | 5648.19 |
| protein hoke | DGR76_03035 | Not Available | Negative | 627526 - 627678 | 5592.11 |
| hypothetical protein | DGR76_03045 | Not Available | Negative | 627941 - 628069 | 5112.15 |
| glutamate--cysteine ligase | DGR76_03050 | Not Available | Positive | 628128 - 629246 | 41570.6 |
| duf1158 domain-containing protein | DGR76_03055 | Not Available | Positive | 629312 - 629560 | 9385.95 |
| mmcq/yjbr family dna-binding protein | DGR76_03060 | Not Available | Positive | 629625 - 629993 | 13998.0 |
| oxygen-insensitive nad(p)h nitroreductase | DGR76_03065 | Not Available | Positive | 630087 - 630740 | 23860.3 |
| mechanosensitive ion channel family protein | DGR76_03070 | Not Available | Positive | 630998 - 632245 | 46582.5 |
| aromatic amino acid transporter arop | DGR76_03075 | Not Available | Negative | 632313 - 633689 | 50648.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | DGR76_03080 | Not Available | Negative | 633791 - 636934 | 114685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




