Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DGR76_02825 | Not Available | Negative | 582034 - 582714 | 25454.9 |
| sensor histidine kinase dpib | DGR76_02830 | Not Available | Negative | 582683 - 584341 | 61659.7 |
| [citrate (pro-3s)-lyase] ligase | DGR76_02835 | Not Available | Positive | 584721 - 585779 | 40093.5 |
| citrate lyase acp | DGR76_02840 | Not Available | Positive | 585794 - 586090 | 10689.9 |
| citrate lyase subunit beta | DGR76_02845 | Not Available | Positive | 586087 - 586995 | 33111.6 |
| citrate lyase subunit alpha | DGR76_02850 | Not Available | Positive | 587006 - 588538 | 55193.0 |
| citrate lyase holo-[acyl-carrier protein] synthase | DGR76_02855 | Not Available | Positive | 588542 - 589093 | 20263.6 |
| triphosphoribosyl-dephospho-coa synthase | DGR76_02860 | Not Available | Positive | 589068 - 589946 | 31674.4 |
| anion permease | DGR76_02865 | Not Available | Positive | 589997 - 591460 | 53109.7 |
| ribonuclease i | DGR76_02870 | Not Available | Positive | 591574 - 592380 | 29623.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




