Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DGR76_02325 | Not Available | Negative | 485766 - 486671 | 34349.4 |
| histidine ammonia-lyase | DGR76_02330 | Not Available | Negative | 486942 - 487088 | 5369.52 |
| hypothetical protein | DGR76_02335 | Not Available | Positive | 487048 - 487233 | 6606.09 |
| succinyl-coa ligase subunit alpha | DGR76_02340 | Not Available | Negative | 487338 - 488207 | 29779.3 |
| succinyl-coa ligase subunit beta | DGR76_02345 | Not Available | Negative | 488207 - 489373 | 41395.1 |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | DGR76_02350 | Not Available | Negative | 489739 - 490956 | 44014.0 |
| 2-oxoglutarate dehydrogenase subunit e1 | DGR76_02355 | Not Available | Negative | 490971 - 493772 | 105068.0 |
| succinate dehydrogenase iron-sulfur subunit | DGR76_02360 | Not Available | Negative | 494073 - 494789 | 26843.4 |
| succinate dehydrogenase flavoprotein subunit | DGR76_02365 | Not Available | Negative | 494805 - 496571 | 64425.6 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | DGR76_02370 | Not Available | Negative | 496571 - 496918 | 12868.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




