Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | DGR76_01855 | Not Available | Positive | 391261 - 391665 | 14655.7 |
| catecholate siderophore receptor fiu | DGR76_01860 | Not Available | Positive | 391930 - 394212 | 81931.4 |
| pkhd-type hydroxylase | DGR76_01865 | Not Available | Positive | 394254 - 394931 | 25530.2 |
| dksa/trar family c4-type zinc finger protein | DGR76_01870 | Not Available | Positive | 395005 - 395271 | 9804.42 |
| duf1471 domain-containing protein | DGR76_01875 | Not Available | Positive | 395537 - 395797 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | DGR76_01880 | Not Available | Negative | 396026 - 397111 | 38861.3 |
| dna-binding protein ybib | DGR76_01885 | Not Available | Negative | 397252 - 398214 | 35050.7 |
| atp-dependent helicase ding | DGR76_01890 | Not Available | Negative | 398242 - 400392 | 81459.9 |
| type iii effector | DGR76_01895 | Not Available | Negative | 400676 - 402688 | 76918.4 |
| atp-dependent rna helicase rhle | DGR76_01900 | Not Available | Negative | 404783 - 406147 | 50008.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




