Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding/permease cydd | DGR76_01405 | Not Available | Positive | 294894 - 296660 | 65046.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | DGR76_01410 | Not Available | Positive | 296661 - 298382 | 62877.2 |
| leucyl/phenylalanyl-trna--protein transferase | DGR76_01415 | Not Available | Positive | 298424 - 299128 | 26620.0 |
| translation initiation factor if-1 | DGR76_01420 | Not Available | Positive | 299413 - 299631 | 8250.1 |
| Trna-ser | Not Available | Not Available | Positive | 299885 - 299972 | Not Available |
| atp-dependent clp protease atp-binding subunit clpa | DGR76_01430 | Not Available | Negative | 300381 - 302657 | 84211.9 |
| atp-dependent clp protease adaptor clps | DGR76_01435 | Not Available | Negative | 302688 - 303008 | 12179.7 |
| cold-shock protein cspd | DGR76_01440 | Not Available | Positive | 303331 - 303555 | 7969.41 |
| macrolide abc transporter permease/atp-binding protein macb | DGR76_01445 | Not Available | Negative | 303628 - 305574 | 70690.8 |
| maca family efflux pump subunit | DGR76_01450 | Not Available | Negative | 305571 - 306686 | 40656.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




