Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | DGR76_01305 | Not Available | Negative | 268509 - 269597 | 39828.5 |
| duf421 domain-containing protein | DGR76_01310 | Not Available | Negative | 269796 - 270488 | 26283.5 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | DGR76_01315 | Not Available | Positive | 270618 - 272378 | 65655.0 |
| formate transporter foca | DGR76_01320 | Not Available | Positive | 272784 - 273641 | 30992.6 |
| formate c-acetyltransferase | DGR76_01325 | Not Available | Positive | 273696 - 275978 | 85355.0 |
| pyruvate formate lyase-activating protein | DGR76_01330 | Not Available | Positive | 276170 - 276910 | 28205.9 |
| inner membrane transporter ycam | DGR76_01340 | Not Available | Negative | 277120 - 278550 | 52499.5 |
| mfs transporter | DGR76_01345 | Not Available | Negative | 278760 - 279908 | 41462.2 |
| hydrolase | DGR76_01350 | Not Available | Positive | 280223 - 280849 | 23089.5 |
| dimethyl sulfoxide reductase subunit c | DGR76_01355 | Not Available | Negative | 280885 - 281748 | 30832.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




