Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DGR76_23320 | Not Available | Positive | 4786723 - 4786947 | 8411.01 |
| type vi secretion system contractile sheath large subunit | DGR76_23325 | Not Available | Positive | 4786998 - 4788473 | 55705.0 |
| type vi secretion system baseplate subunit tsse | DGR76_23330 | Not Available | Positive | 4788480 - 4788893 | 15524.0 |
| type vi secretion system baseplate subunit tssf | DGR76_23335 | Not Available | Positive | 4788897 - 4790747 | 71037.9 |
| type vi secretion system baseplate subunit tssg | DGR76_23340 | Not Available | Positive | 4790711 - 4791793 | 40247.1 |
| type vi secretion system-associated fha domain protein tagh | DGR76_23345 | Not Available | Positive | 4791818 - 4793098 | 47349.7 |
| hypothetical protein | DGR76_23360 | Not Available | Positive | 4794118 - 4795467 | 50834.6 |
| hcp family type vi secretion system effector | DGR76_23365 | Not Available | Positive | 4795494 - 4795973 | 17883.2 |
| peptidoglycan-binding protein | DGR76_23375 | Not Available | Positive | 4796243 - 4796890 | 24604.6 |
| hypothetical protein | DGR76_23380 | Not Available | Positive | 4796893 - 4797342 | 17230.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




