Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DGR76_22790 | Not Available | Negative | 4722063 - 4722857 | 28741.6 |
| abc transporter permease | DGR76_22795 | Not Available | Negative | 4722847 - 4723788 | 34349.1 |
| abc transporter atp-binding protein | DGR76_22800 | Not Available | Negative | 4723789 - 4724802 | 37065.9 |
| extracellular solute-binding protein | DGR76_22805 | Not Available | Negative | 4724820 - 4725965 | 42331.4 |
| plp-dependent aminotransferase family protein | DGR76_22810 | Not Available | Negative | 4726210 - 4727616 | 52837.9 |
| antitoxin hicb | DGR76_22815 | Not Available | Negative | 4727695 - 4728111 | 15247.5 |
| type ii toxin-antitoxin system hica family toxin | DGR76_22820 | Not Available | Negative | 4728157 - 4728333 | 6725.24 |
| duf2554 family protein | DGR76_22825 | Not Available | Positive | 4728555 - 4728785 | 8709.32 |
| u32 family peptidase | DGR76_22830 | Not Available | Negative | 4728877 - 4730838 | 72764.0 |
| xre family transcriptional regulator | DGR76_22835 | Not Available | Negative | 4730911 - 4731447 | 19714.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




