Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa--acetoacetyl-coa transferase subunit alpha/beta | DGR76_22205 | Not Available | Negative | 4592159 - 4593754 | 57574.7 |
| is1 family transposase | DGR76_22210 | Not Available | Positive | 4593852 - 4593923 | 2454.95 |
| fadr family transcriptional regulator | DGR76_22215 | Not Available | Positive | 4594202 - 4594894 | 26076.5 |
| mfs transporter | DGR76_22220 | Not Available | Positive | 4594917 - 4596344 | 51494.9 |
| ribose operon repressor | DGR76_22225 | Not Available | Negative | 4596310 - 4597302 | 36614.1 |
| ribokinase | DGR76_22230 | Not Available | Negative | 4597306 - 4598235 | 32292.4 |
| ribose abc transporter substrate-binding protein rbsb | DGR76_22235 | Not Available | Negative | 4598361 - 4599251 | 30940.2 |
| ribose abc transporter permease | DGR76_22240 | Not Available | Negative | 4599276 - 4600241 | 33454.0 |
| ribose import atp-binding protein rbsa | DGR76_22245 | Not Available | Negative | 4600246 - 4601751 | 55045.0 |
| d-ribose pyranase | DGR76_22250 | Not Available | Negative | 4601759 - 4602178 | 15284.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




