Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | DGR76_21210 | Not Available | Positive | 4390166 - 4390906 | 27049.6 |
| fe-s cluster assembly transcriptional regulator iscr | DGR76_21215 | Not Available | Positive | 4391176 - 4391664 | 17337.6 |
| iscs subfamily cysteine desulfurase | DGR76_21220 | Not Available | Positive | 4391780 - 4392994 | 45092.2 |
| iron-sulfur cluster scaffold-like protein | DGR76_21225 | Not Available | Positive | 4393022 - 4393408 | 13849.3 |
| iron-sulfur cluster assembly protein isca | DGR76_21230 | Not Available | Positive | 4393425 - 4393748 | 11586.8 |
| co-chaperone protein hscb | DGR76_21235 | Not Available | Positive | 4393844 - 4394359 | 20138.8 |
| fe-s protein assembly chaperone hsca | DGR76_21240 | Not Available | Positive | 4394376 - 4396226 | 65661.3 |
| isc system 2fe-2s type ferredoxin | DGR76_21245 | Not Available | Positive | 4396228 - 4396563 | 12345.5 |
| fe-s assembly protein iscx | DGR76_21250 | Not Available | Positive | 4396575 - 4396775 | 7731.92 |
| peptidase b | DGR76_21255 | Not Available | Positive | 4397020 - 4398303 | 46228.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




