Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DGR76_20950 | Not Available | Positive | 4335060 - 4335263 | 7646.15 |
| trna/rrna methyltransferase | DGR76_20955 | Not Available | Positive | 4335253 - 4336290 | 37800.5 |
| uracil-dna glycosylase | DGR76_20960 | Not Available | Negative | 4336338 - 4337027 | 25682.6 |
| autonomous glycyl radical cofactor grca | DGR76_20965 | Not Available | Positive | 4337332 - 4337715 | 14269.0 |
| cysteine/o-acetylserine transporter | DGR76_20970 | Not Available | Negative | 4337771 - 4338358 | 21321.6 |
| lysr family transcriptional regulator | DGR76_20975 | Not Available | Positive | 4338461 - 4339342 | 33364.3 |
| atp-dependent rna helicase srmb | DGR76_20980 | Not Available | Negative | 4339375 - 4340709 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | DGR76_20985 | Not Available | Positive | 4340841 - 4341578 | 27197.4 |
| l-aspartate oxidase | DGR76_20990 | Not Available | Negative | 4341563 - 4343185 | 60261.8 |
| ecf rna polymerase sigma-e factor | DGR76_20995 | Not Available | Positive | 4343593 - 4344168 | 21697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




