Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | DGR76_20080 | Not Available | Positive | 4157742 - 4159136 | 51960.3 |
| l-rhamnose mutarotase | DGR76_20085 | Not Available | Negative | 4159177 - 4159491 | 12293.6 |
| rhamnulose-1-phosphate aldolase | DGR76_20090 | Not Available | Negative | 4159501 - 4160325 | 30177.2 |
| l-rhamnose isomerase | DGR76_20095 | Not Available | Negative | 4160776 - 4162035 | 47202.9 |
| rhamnulokinase | DGR76_20100 | Not Available | Negative | 4162032 - 4163501 | 54114.3 |
| transcriptional activator rhas | DGR76_20105 | Not Available | Positive | 4163789 - 4164625 | 32298.1 |
| hth-type transcriptional activator rhar | DGR76_20110 | Not Available | Positive | 4164609 - 4165547 | 35684.5 |
| rhamnose/proton symporter rhat | DGR76_20115 | Not Available | Negative | 4165544 - 4166578 | 37286.1 |
| superoxide dismutase | DGR76_20120 | Not Available | Positive | 4166863 - 4167483 | 23080.2 |
| 2-keto-3-deoxygluconate permease | DGR76_20125 | Not Available | Positive | 4167743 - 4168726 | 33671.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




