Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory protein fdhe | DGR76_20030 | Not Available | Negative | 4144688 - 4145617 | 34690.5 |
| formate dehydrogenase cytochrome b556(fdo) subunit | DGR76_20035 | Not Available | Negative | 4145614 - 4146249 | 24607.7 |
| formate dehydrogenase-o iron-sulfur subunit | DGR76_20040 | Not Available | Negative | 4146246 - 4147148 | 33102.1 |
| formate dehydrogenase-n subunit alpha | DGR76_20045 | Not Available | Negative | 4147161 - 4150211 | 112446.0 |
| sulfurtransferase fdhd | DGR76_20050 | Not Available | Positive | 4150405 - 4151238 | 30533.8 |
| duf3829 domain-containing protein | DGR76_20055 | Not Available | Positive | 4151391 - 4152446 | 39351.4 |
| hth domain-containing protein | DGR76_20060 | Not Available | Negative | 4152548 - 4154296 | 65993.7 |
| aminopeptidase | DGR76_20065 | Not Available | Negative | 4154296 - 4155366 | 38739.6 |
| pts fructose-like transporter subunit iibc | DGR76_20070 | Not Available | Negative | 4155356 - 4156807 | 51139.5 |
| pts fructose transporter subunit iia | DGR76_20075 | Not Available | Negative | 4156818 - 4157264 | 16068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




