Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein ynek | DGR76_19765 | Not Available | Negative | 4092134 - 4093249 | 42800.6 |
| lysr family transcriptional regulator | DGR76_19770 | Not Available | Negative | 4093327 - 4094208 | 32471.9 |
| succinate-semialdehyde dehydrogenase | DGR76_19775 | Not Available | Positive | 4094309 - 4095697 | 49746.8 |
| glutaminase 2 | DGR76_19780 | Not Available | Positive | 4095761 - 4096687 | 33517.6 |
| duf4186 domain-containing protein | DGR76_19785 | Not Available | Positive | 4096687 - 4097046 | 13548.5 |
| ggdef domain-containing protein | DGR76_19795 | Not Available | Positive | 4097656 - 4098603 | 34368.3 |
| tagaturonate reductase | DGR76_19800 | Not Available | Positive | 4098830 - 4100281 | 54820.3 |
| hypothetical protein | DGR76_19805 | Not Available | Positive | 4100478 - 4101392 | 34823.0 |
| trans-aconitate 2-methyltransferase | DGR76_19810 | Not Available | Negative | 4101396 - 4102154 | 28959.3 |
| transposase | DGR76_19815 | Not Available | Negative | 4102242 - 4102413 | 5821.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




