Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | DGR76_17780 | Not Available | Positive | 3688585 - 3689190 | 22530.8 |
| glucose uptake inhibitor sgrt | DGR76_17785 | Not Available | Negative | 3689298 - 3689429 | 5382.47 |
| transcriptional regulator sgrr | DGR76_17790 | Not Available | Positive | 3689518 - 3691176 | 64324.2 |
| type iii effector | DGR76_17795 | Not Available | Negative | 3691405 - 3691974 | 21495.3 |
| thiamine abc transporter substrate binding subunit | DGR76_17800 | Not Available | Positive | 3692346 - 3693329 | 36200.3 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DGR76_17805 | Not Available | Positive | 3693305 - 3694915 | 59353.5 |
| thiamine import atp-binding protein thiq | DGR76_17810 | Not Available | Positive | 3694899 - 3695597 | 25003.6 |
| deda family protein | DGR76_17815 | Not Available | Negative | 3695711 - 3696475 | 28254.8 |
| arabinose operon regulatory protein | DGR76_17820 | Not Available | Negative | 3696561 - 3697439 | 33385.8 |
| ribulokinase | DGR76_17830 | Not Available | Positive | 3697777 - 3699477 | 61229.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




