Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose-binding periplasmic protein | DGR76_16830 | Not Available | Negative | 3473568 - 3474560 | 35736.1 |
| xylose isomerase | DGR76_16835 | Not Available | Positive | 3474926 - 3476248 | 49721.7 |
| xylulokinase | DGR76_16840 | Not Available | Positive | 3476320 - 3477774 | 52562.2 |
| hypothetical protein | DGR76_16845 | Not Available | Positive | 3477943 - 3478284 | 12553.0 |
| yiab family inner membrane protein | DGR76_16850 | Not Available | Positive | 3478330 - 3478767 | 16123.6 |
| acyltransferase | DGR76_16855 | Not Available | Negative | 3478809 - 3479804 | 37602.1 |
| hypothetical protein | DGR76_16860 | Not Available | Positive | 3479979 - 3480278 | 11340.8 |
| glycine--trna ligase subunit alpha | DGR76_16865 | Not Available | Positive | 3480373 - 3481284 | 34718.2 |
| glycine--trna ligase subunit beta | DGR76_16870 | Not Available | Positive | 3481294 - 3483363 | 76817.2 |
| hok/gef family protein | DGR76_16875 | Not Available | Positive | 3483686 - 3483838 | 5912.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




