Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | DGR76_16055 | Not Available | Negative | 3299905 - 3300471 | 20407.8 |
| hypothetical protein | DGR76_16060 | Not Available | Negative | 3300493 - 3301242 | 27680.3 |
| transcriptional regulator | DGR76_16065 | Not Available | Negative | 3301399 - 3302358 | 36943.0 |
| multidrug resistance protein mdtl | DGR76_16070 | Not Available | Negative | 3302333 - 3303508 | 41540.3 |
| low affinity tryptophan permease | DGR76_16075 | Not Available | Negative | 3303640 - 3304887 | 45213.2 |
| tryptophanase | DGR76_16080 | Not Available | Negative | 3304978 - 3306393 | 52776.4 |
| tryptophanase leader peptide | DGR76_16085 | Not Available | Negative | 3306614 - 3306688 | 2894.56 |
| shet2/espl2 family type iii secretion system effector toxin | DGR76_16090 | Not Available | Positive | 3307089 - 3309251 | 81471.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DGR76_16095 | Not Available | Negative | 3309390 - 3310754 | 49171.7 |
| membrane protein insertase yidc | DGR76_16100 | Not Available | Negative | 3310860 - 3312506 | 61587.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




