Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator kdgr | DGR76_15185 | Not Available | Negative | 3145182 - 3145973 | 30031.1 |
| mfs transporter | DGR76_15190 | Not Available | Positive | 3146150 - 3147523 | 48168.8 |
| protease htpx | DGR76_15195 | Not Available | Negative | 3147572 - 3148453 | 31959.3 |
| tail-specific protease | DGR76_15200 | Not Available | Negative | 3148645 - 3150693 | 76637.3 |
| rna chaperone proq | DGR76_15205 | Not Available | Negative | 3150713 - 3151411 | 25835.9 |
| gaf domain-containing protein | DGR76_15210 | Not Available | Negative | 3151508 - 3152005 | 18080.5 |
| paraquat-inducible membrane protein a | DGR76_15215 | Not Available | Positive | 3152135 - 3153418 | 48276.3 |
| pqib family protein | DGR76_15220 | Not Available | Positive | 3153387 - 3156020 | 94979.0 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | DGR76_15225 | Not Available | Positive | 3156100 - 3157539 | 53252.4 |
| duf1480 family protein | DGR76_15230 | Not Available | Positive | 3157656 - 3157892 | 8753.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




