Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | DGR76_12660 | Not Available | Positive | 2649966 - 2650559 | 21559.4 |
| hypothetical protein | DGR76_12670 | Not Available | Positive | 2651996 - 2652232 | 9180.06 |
| protein-serine/threonine phosphatase | DGR76_12675 | Not Available | Negative | 2652273 - 2652929 | 25083.7 |
| dna mismatch repair protein muts | DGR76_12680 | Not Available | Negative | 2653035 - 2655596 | 95247.5 |
| hypothetical protein | DGR76_12685 | Not Available | Positive | 2655672 - 2655851 | 6752.81 |
| nitrous oxide-stimulated promoter family protein | DGR76_12690 | Not Available | Positive | 2655883 - 2656236 | 13904.1 |
| formate hydrogenlyase transcriptional activator flha | DGR76_12695 | Not Available | Negative | 2656273 - 2658351 | 78415.4 |
| hydrogenase expression/formation protein hype | DGR76_12700 | Not Available | Negative | 2658425 - 2659435 | 35126.6 |
| hydrogenase formation protein hypd | DGR76_12705 | Not Available | Negative | 2659432 - 2660553 | 41366.7 |
| hydrogenase assembly protein hypc | DGR76_12710 | Not Available | Negative | 2660553 - 2660825 | 9732.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




