Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine transporter | DGR76_12355 | Not Available | Negative | 2584045 - 2585334 | 46909.2 |
| log family protein ygdh | DGR76_12360 | Not Available | Negative | 2585891 - 2587255 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DGR76_12365 | Not Available | Negative | 2587367 - 2588215 | 32560.1 |
| protein syd | DGR76_12370 | Not Available | Positive | 2588283 - 2588828 | 20709.6 |
| yqcc family protein | DGR76_12375 | Not Available | Positive | 2589450 - 2589779 | 12742.2 |
| trna pseudouridine(65) synthase truc | DGR76_12380 | Not Available | Positive | 2589779 - 2590561 | 29667.5 |
| flavodoxin | DGR76_12385 | Not Available | Positive | 2590579 - 2591028 | 16305.1 |
| mfs transporter | DGR76_12390 | Not Available | Positive | 2591463 - 2592815 | 49145.0 |
| glucarate dehydratase | DGR76_12395 | Not Available | Positive | 2592817 - 2594157 | 48841.3 |
| glucarate dehydratase | DGR76_12400 | Not Available | Positive | 2594178 - 2595518 | 49143.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




