Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | DGR76_12305 | Not Available | Positive | 2572320 - 2573420 | 41937.5 |
| l-fucose operon activator | DGR76_12310 | Not Available | Negative | 2573464 - 2574195 | 27363.7 |
| l-fucose mutarotase | DGR76_12315 | Not Available | Negative | 2574253 - 2574675 | 15474.0 |
| l-fuculokinase | DGR76_12320 | Not Available | Negative | 2574677 - 2576095 | 52261.7 |
| l-fucose isomerase | DGR76_12325 | Not Available | Negative | 2576204 - 2577979 | 64980.3 |
| l-fucose-proton symporter | DGR76_12330 | Not Available | Negative | 2578012 - 2579328 | 47547.6 |
| l-fuculose-phosphate aldolase | DGR76_12335 | Not Available | Positive | 2579875 - 2580522 | 23786.7 |
| lactaldehyde reductase | DGR76_12340 | Not Available | Positive | 2580550 - 2581698 | 40537.8 |
| flap endonuclease xni | DGR76_12345 | Not Available | Negative | 2581753 - 2582508 | 28167.7 |
| l-serine ammonia-lyase | DGR76_12350 | Not Available | Negative | 2582620 - 2583987 | 48725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




