Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion protein | DGR76_12000 | Not Available | Negative | 2513186 - 2513479 | 11102.3 |
| luxr family transcriptional regulator | DGR76_12005 | Not Available | Negative | 2513481 - 2513981 | 19143.0 |
| prgh/eprh family type iii secretion apparatus protein | DGR76_12010 | Not Available | Positive | 2514230 - 2515420 | 45542.1 |
| type iii secretion system needle complex protein | DGR76_12015 | Not Available | Positive | 2515433 - 2515672 | 9038.44 |
| hypothetical protein | DGR76_12020 | Not Available | Positive | 2515692 - 2516024 | 12299.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | DGR76_12025 | Not Available | Positive | 2516021 - 2516755 | 27595.7 |
| type iii secretion apparatus protein orga/mxik | DGR76_12030 | Not Available | Positive | 2516771 - 2517352 | 22722.8 |
| hypothetical protein | DGR76_12035 | Not Available | Positive | 2517294 - 2518001 | 27423.1 |
| luxr family transcriptional regulator | DGR76_12040 | Not Available | Positive | 2518224 - 2518856 | 23413.7 |
| lytic transglycosylase domain-containing protein | DGR76_12045 | Not Available | Negative | 2518874 - 2519377 | 19241.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




