Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | DGR76_11575 | Not Available | Positive | 2405254 - 2406552 | 48195.4 |
| atp-dependent clp protease proteolytic subunit | DGR76_11580 | Not Available | Positive | 2406798 - 2407421 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | DGR76_11585 | Not Available | Positive | 2407547 - 2408821 | 46358.7 |
| lon protease | DGR76_11590 | Not Available | Positive | 2409009 - 2411363 | 87443.4 |
| dna-binding protein hu-beta | DGR76_11595 | Not Available | Positive | 2411572 - 2411844 | 9226.08 |
| peptidyl-prolyl cis-trans isomerase | DGR76_11600 | Not Available | Positive | 2412036 - 2413907 | 68139.7 |
| hypothetical protein | DGR76_11605 | Not Available | Positive | 2414058 - 2414429 | 12686.3 |
| ybgc/fadm family acyl-coa thioesterase | DGR76_11610 | Not Available | Positive | 2414535 - 2414933 | 15098.2 |
| 7-cyano-7-deazaguanine synthase | DGR76_11615 | Not Available | Negative | 2414985 - 2415680 | 25423.5 |
| sgrr family transcriptional regulator | DGR76_11620 | Not Available | Negative | 2415745 - 2417445 | 64936.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




