Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | DGR76_11425 | Not Available | Positive | 2375970 - 2377817 | 66636.3 |
| protein translocase subunit secf | DGR76_11430 | Not Available | Positive | 2377828 - 2378799 | 35384.6 |
| hnh endonuclease | DGR76_11435 | Not Available | Positive | 2378928 - 2379275 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | DGR76_11440 | Not Available | Negative | 2379452 - 2380336 | 33590.6 |
| duf3251 domain-containing protein | DGR76_11445 | Not Available | Negative | 2380635 - 2381174 | 19603.6 |
| transcriptional regulator nrdr | DGR76_11450 | Not Available | Positive | 2381324 - 2381773 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DGR76_11455 | Not Available | Positive | 2381777 - 2382880 | 40364.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | DGR76_11460 | Not Available | Positive | 2382969 - 2383439 | 16157.4 |
| n utilization substance protein b | DGR76_11465 | Not Available | Positive | 2383459 - 2383878 | 15689.9 |
| thiamine-monophosphate kinase | DGR76_11470 | Not Available | Positive | 2383956 - 2384933 | 35042.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




