Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l16 arginine hydroxylase | DGR76_00055 | Not Available | Positive | 9175 - 10296 | 42567.2 |
| peptidase t | DGR76_00060 | Not Available | Negative | 10345 - 11571 | 44912.0 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | DGR76_00065 | Not Available | Positive | 11821 - 12957 | 43030.8 |
| spermidine/putrescine abc transporter permease potb | DGR76_00070 | Not Available | Positive | 12941 - 13798 | 32210.3 |
| spermidine/putrescine abc transporter permease | DGR76_00075 | Not Available | Positive | 13795 - 14589 | 29112.7 |
| spermidine/putrescine abc transporter substrate-binding protein potd | DGR76_00080 | Not Available | Positive | 14586 - 15632 | 38883.1 |
| nad-dependent deacylase | DGR76_00085 | Not Available | Negative | 15788 - 16609 | 30952.2 |
| n-acetylglucosamine kinase | DGR76_00090 | Not Available | Negative | 16625 - 17536 | 33044.6 |
| lipoprotein-releasing abc transporter permease subunit lole | DGR76_00095 | Not Available | Negative | 17565 - 18809 | 45312.0 |
| lipoprotein-releasing system atp-binding protein lold | DGR76_00100 | Not Available | Negative | 18809 - 19510 | 25439.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




