Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | DGR76_08925 | Not Available | Negative | 1863159 - 1864061 | 31447.1 |
| type 1 fimbrial protein | DGR76_08930 | Not Available | Negative | 1864081 - 1864584 | 17385.4 |
| type 1 fimbrial protein | DGR76_08935 | Not Available | Negative | 1864597 - 1865127 | 18763.5 |
| fimbrial biogenesis outer membrane usher protein | DGR76_08940 | Not Available | Negative | 1865137 - 1867773 | 96502.9 |
| chaperone protein fimc | DGR76_08945 | Not Available | Negative | 1867840 - 1868565 | 26630.5 |
| fimbrin-like protein fimi | DGR76_08950 | Not Available | Negative | 1868602 - 1869141 | 19374.4 |
| type-1 fimbrial protein subunit a | DGR76_08955 | Not Available | Negative | 1869206 - 1869754 | 18110.2 |
| hypothetical protein | DGR76_08960 | Not Available | Positive | 1869977 - 1870156 | 6920.29 |
| tyrosine recombinase | DGR76_08965 | Not Available | Negative | 1870236 - 1870832 | 23102.7 |
| integrase | DGR76_08970 | Not Available | Negative | 1871310 - 1871912 | 23020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




