Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 1285631 - 1285704 | Not Available |
| lysm peptidoglycan-binding domain-containing protein | DGR76_06170 | Not Available | Negative | 1285783 - 1286538 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | DGR76_06175 | Not Available | Positive | 1286954 - 1289251 | 82663.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | DGR76_06180 | Not Available | Positive | 1289262 - 1290140 | 31602.6 |
| xanthine dehydrogenase iron-sulfur-binding subunit | DGR76_06185 | Not Available | Positive | 1290137 - 1290616 | 16922.7 |
| sigma-54-dependent fis family transcriptional regulator | DGR76_06190 | Not Available | Negative | 1290656 - 1292434 | 66114.0 |
| knotted carbamoyltransferase ygew | DGR76_06195 | Not Available | Positive | 1292910 - 1294100 | 44188.9 |
| plp-dependent lyase/thiolase | DGR76_06200 | Not Available | Positive | 1294158 - 1295354 | 43330.1 |
| ygey family selenium metabolism-linked hydrolase | DGR76_06205 | Not Available | Positive | 1295412 - 1296623 | 44806.4 |
| d-phenylhydantoinase | DGR76_06210 | Not Available | Positive | 1296676 - 1298061 | 51046.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




