Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | DGR76_05860 | Not Available | Positive | 1218604 - 1218858 | 9656.61 |
| u32 family peptidase | DGR76_05865 | Not Available | Negative | 1219131 - 1220492 | 51196.1 |
| type ii toxin-antitoxin system rele/pare family toxin | DGR76_05870 | Not Available | Negative | 1220595 - 1220891 | 11540.8 |
| type ii toxin-antitoxin system pard family antitoxin | DGR76_05875 | Not Available | Negative | 1220893 - 1221144 | 9554.46 |
| duf1508 domain-containing protein | DGR76_05880 | Not Available | Negative | 1221387 - 1221719 | 12064.0 |
| two-component system response regulator baer | DGR76_05885 | Not Available | Negative | 1221910 - 1222632 | 27629.5 |
| two-component system sensor histidine kinase baes | DGR76_05890 | Not Available | Negative | 1222629 - 1224032 | 52047.4 |
| multidrug transporter subunit mdtd | DGR76_05895 | Not Available | Negative | 1224029 - 1225444 | 50946.2 |
| multidrug efflux rnd transporter permease subunit mdtc | DGR76_05900 | Not Available | Negative | 1225445 - 1228522 | 110960.0 |
| multidrug efflux rnd transporter permease subunit mdtb | DGR76_05905 | Not Available | Negative | 1228523 - 1231645 | 112087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




