Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yohp | DGR76_05485 | Not Available | Negative | 1136855 - 1136938 | 3092.28 |
| multidrug resistance outer membrane protein mdtq | DGR76_05490 | Not Available | Positive | 1137162 - 1138598 | 52236.1 |
| sdr family oxidoreductase | DGR76_05495 | Not Available | Positive | 1138651 - 1139412 | 26905.3 |
| deda family protein | DGR76_05500 | Not Available | Negative | 1139542 - 1140120 | 21422.9 |
| yip1 family protein | DGR76_05505 | Not Available | Positive | 1140290 - 1140877 | 21692.0 |
| d-alanyl-d-alanine endopeptidase | DGR76_05510 | Not Available | Positive | 1141051 - 1141983 | 33855.3 |
| d-lactate dehydrogenase | DGR76_05515 | Not Available | Negative | 1142022 - 1143737 | 64728.1 |
| beta-glucosidase | DGR76_05520 | Not Available | Positive | 1143933 - 1146230 | 83478.7 |
| abc transporter substrate-binding protein | DGR76_05525 | Not Available | Positive | 1146482 - 1147399 | 32625.0 |
| abc transporter permease | DGR76_05530 | Not Available | Positive | 1147406 - 1148563 | 41241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




