Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | DGR76_05435 | Not Available | Negative | 1127246 - 1128130 | 31541.6 |
| cidb/lrgb family autolysis modulator | DGR76_05440 | Not Available | Negative | 1128260 - 1128955 | 24471.1 |
| hypothetical protein | DGR76_05445 | Not Available | Negative | 1128952 - 1129350 | 14593.6 |
| lysr family transcriptional regulator | DGR76_05450 | Not Available | Negative | 1129481 - 1130389 | 33802.3 |
| mfs transporter | DGR76_05455 | Not Available | Positive | 1130516 - 1131874 | 48418.7 |
| gentisate 1,2-dioxygenase | DGR76_05460 | Not Available | Positive | 1131886 - 1132914 | 38481.4 |
| faa hydrolase family protein | DGR76_05465 | Not Available | Positive | 1132930 - 1133631 | 25906.9 |
| maleylacetoacetate isomerase | DGR76_05470 | Not Available | Positive | 1133640 - 1134284 | 24242.1 |
| 3-hydroxybenzoate 6-monooxygenase | DGR76_05475 | Not Available | Positive | 1134299 - 1135492 | 43975.4 |
| trna dihydrouridine(16) synthase dusc | DGR76_05480 | Not Available | Positive | 1135644 - 1136591 | 35211.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




