Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis atp-binding export protein ccma | DGR76_05135 | Not Available | Positive | 1063771 - 1064394 | 23054.7 |
| heme exporter protein b | DGR76_05140 | Not Available | Positive | 1064391 - 1065053 | 23620.3 |
| heme exporter protein c | DGR76_05145 | Not Available | Positive | 1065095 - 1065832 | 27886.9 |
| heme exporter protein d | DGR76_05150 | Not Available | Positive | 1065829 - 1066038 | 7745.59 |
| cytochrome c-type biogenesis protein ccme | DGR76_05155 | Not Available | Positive | 1066035 - 1066514 | 17699.4 |
| heme lyase ccmf/nrfe family subunit | DGR76_05160 | Not Available | Positive | 1066511 - 1068454 | 71482.7 |
| thiol:disulfide interchange protein | DGR76_05165 | Not Available | Positive | 1068451 - 1069008 | 20810.1 |
| cytochrome c-type biogenesis protein ccmh | DGR76_05170 | Not Available | Positive | 1069005 - 1070057 | 39091.3 |
| nitrate/nitrite response regulator protein narp | DGR76_05175 | Not Available | Negative | 1070092 - 1070739 | 23676.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | DGR76_05180 | Not Available | Positive | 1071317 - 1073650 | 82042.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




