Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1211606 bp
Thymine Count
1205922 bp
Guanine Count
1228989 bp
Cytosine Count
1238887 bp
Genome Length
4885404 bp
Protein-coding Genes
4414 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease smrb | DGR76_04465 | Not Available | Negative | 914688 - 915239 | 21014.5 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | DGR76_04470 | Not Available | Positive | 915405 - 916337 | 35003.6 |
| chorismate synthase | DGR76_04475 | Not Available | Positive | 916372 - 917457 | 39126.8 |
| penicillin-insensitive murein endopeptidase | DGR76_04480 | Not Available | Positive | 917461 - 918285 | 30176.5 |
| hypothetical protein | DGR76_04485 | Not Available | Positive | 918285 - 919094 | 28659.2 |
| elongation factor p hydroxylase | DGR76_04490 | Not Available | Positive | 919094 - 919642 | 21174.7 |
| yfcl family protein | DGR76_04495 | Not Available | Positive | 919676 - 919954 | 10000.6 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | DGR76_04500 | Not Available | Negative | 920075 - 922081 | 74469.2 |
| beta-ketoacyl-acp synthase i | DGR76_04505 | Not Available | Positive | 922240 - 923460 | 42615.8 |
| hypothetical protein | DGR76_04510 | Not Available | Negative | 923572 - 923793 | 8501.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




