Pararobbsia silviterrae strain DHC34

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pararobbsia

Description

Pararobbsia silviterrae strain DHC34 is characterized by possessing a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number RBZU00000000.1. The presence of only one replicon may suggest a streamlined genomic organization, which can be advantageous for the organism in terms of replication efficiency and stability. This trait can influence the strain's adaptability and potential for survival in various environments. In ecological contexts, the streamlined genome of Pararobbsia silviterrae strain DHC34 may allow it to occupy specific niches or thrive in particular habitats where resource availability and competition are factors. The genomic simplicity could facilitate rapid responses to environmental changes, promoting resilience in fluctuating conditions. Overall, the unique genomic trait of a single replicon in Pararobbsia silviterrae strain DHC34 provides insights into its potential ecological strategies and evolutionary adaptations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPararobbsia
SpeciesPararobbsia silviterrae
Strainstrain DHC34

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pararobbsia silviterrae strain DHC34 scaffold43, whole genome

Gene Summary

Adenine Count

1181458 bp

Thymine Count

1193316 bp

Guanine Count

2156308 bp

Cytosine Count

2110670 bp

Genome Length

6642683 bp

Protein-coding Genes

5540 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaD7S86_03150Not AvailableNegative684446 - 68502720148.6
crossover junction endodeoxyribonuclease ruvcD7S86_03155Not AvailableNegative685129 - 68567118555.7
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purhD7S86_03160Not AvailableNegative685716 - 68729356345.3
fis family transcriptional regulatorD7S86_03165Not AvailableNegative687349 - 6875828812.63
trna dihydrouridine synthase dusbD7S86_03170Not AvailableNegative687579 - 68865238835.2
ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylaseD7S86_03175Not AvailableNegative688843 - 69007243108.5
m24 family metallopeptidaseD7S86_03180Not AvailableNegative690069 - 69148151387.5
nucleotidyltransferase family proteinD7S86_03185Not AvailableNegative691507 - 69221125279.2
aminoglycoside phosphotransferaseD7S86_03190Not AvailableNegative692236 - 69330639937.0
lps-assembly protein lptdD7S86_03195Not AvailablePositive693540 - 69590387754.0

Displaying genes 771 – 780 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.