Pararobbsia silviterrae strain DHC34

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pararobbsia

Description

Pararobbsia silviterrae strain DHC34 is characterized by possessing a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number RBZU00000000.1. The presence of only one replicon may suggest a streamlined genomic organization, which can be advantageous for the organism in terms of replication efficiency and stability. This trait can influence the strain's adaptability and potential for survival in various environments. In ecological contexts, the streamlined genome of Pararobbsia silviterrae strain DHC34 may allow it to occupy specific niches or thrive in particular habitats where resource availability and competition are factors. The genomic simplicity could facilitate rapid responses to environmental changes, promoting resilience in fluctuating conditions. Overall, the unique genomic trait of a single replicon in Pararobbsia silviterrae strain DHC34 provides insights into its potential ecological strategies and evolutionary adaptations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPararobbsia
SpeciesPararobbsia silviterrae
Strainstrain DHC34

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pararobbsia silviterrae strain DHC34 scaffold43, whole genome

Gene Summary

Adenine Count

1181458 bp

Thymine Count

1193316 bp

Guanine Count

2156308 bp

Cytosine Count

2110670 bp

Genome Length

6642683 bp

Protein-coding Genes

5540 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative major head proteinD7S86_28440Not AvailableNegative6531113 - 653313472817.9
Putative portal proteinD7S86_28445Not AvailableNegative6533251 - 653465451499.4
Putative peptidase bD7S86_28450Not AvailableNegative6534657 - 65348607397.87
Putative terminase large subunitD7S86_28455Not AvailableNegative6534863 - 653696278668.9
Putative small terminase subunitD7S86_28460Not AvailableNegative6536910 - 653754523146.6
16s ribosomal rnaNot AvailableNot AvailablePositive14 - 1551Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive131 - 3023Not Available
chemotaxis protein cheaD7S86_00005Not AvailableNegative1 - 89130808.5
5s ribosomal rnaNot AvailableNot AvailablePositive1179 - 1291Not Available
response regulatorD7S86_00010Not AvailableNegative1012 - 138913416.1

Displaying genes 141 – 150 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.