Pararobbsia silviterrae strain DHC34

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pararobbsia

Description

Pararobbsia silviterrae strain DHC34 is characterized by possessing a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number RBZU00000000.1. The presence of only one replicon may suggest a streamlined genomic organization, which can be advantageous for the organism in terms of replication efficiency and stability. This trait can influence the strain's adaptability and potential for survival in various environments. In ecological contexts, the streamlined genome of Pararobbsia silviterrae strain DHC34 may allow it to occupy specific niches or thrive in particular habitats where resource availability and competition are factors. The genomic simplicity could facilitate rapid responses to environmental changes, promoting resilience in fluctuating conditions. Overall, the unique genomic trait of a single replicon in Pararobbsia silviterrae strain DHC34 provides insights into its potential ecological strategies and evolutionary adaptations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPararobbsia
SpeciesPararobbsia silviterrae
Strainstrain DHC34

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pararobbsia silviterrae strain DHC34 scaffold43, whole genome

Gene Summary

Adenine Count

1181458 bp

Thymine Count

1193316 bp

Guanine Count

2156308 bp

Cytosine Count

2110670 bp

Genome Length

6642683 bp

Protein-coding Genes

5540 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4126 domain-containing proteinD7S86_05490Not AvailablePositive1215337 - 121595121231.5
ftsx-like permease family proteinD7S86_05495Not AvailablePositive1216026 - 121853089358.8
tigr00730 family rossman fold proteinD7S86_05500Not AvailableNegative1218700 - 121928421041.4
tetr/acrr family transcriptional regulatorD7S86_05505Not AvailableNegative1219467 - 122016527422.7
diacylglycerol kinaseD7S86_05510Not AvailableNegative1220245 - 122065214833.2
glycosyltransferase family 1 proteinD7S86_05515Not AvailableNegative1220840 - 122187137945.8
udp-2,3-diacylglucosamine diphosphataseD7S86_05520Not AvailableNegative1221898 - 122282735193.8
rdd family proteinD7S86_05525Not AvailableNegative1222952 - 122346418886.5
duf3106 domain-containing proteinD7S86_05530Not AvailableNegative1223461 - 122420727222.1
duf3619 family proteinD7S86_05535Not AvailableNegative1224247 - 122468115126.1

Displaying genes 1231 – 1240 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.