Pararobbsia silviterrae strain DHC34

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pararobbsia

Description

Pararobbsia silviterrae strain DHC34 is characterized by possessing a single replicon, which is indicative of its genomic structure. The strain is cataloged under the accession number RBZU00000000.1. The presence of only one replicon may suggest a streamlined genomic organization, which can be advantageous for the organism in terms of replication efficiency and stability. This trait can influence the strain's adaptability and potential for survival in various environments. In ecological contexts, the streamlined genome of Pararobbsia silviterrae strain DHC34 may allow it to occupy specific niches or thrive in particular habitats where resource availability and competition are factors. The genomic simplicity could facilitate rapid responses to environmental changes, promoting resilience in fluctuating conditions. Overall, the unique genomic trait of a single replicon in Pararobbsia silviterrae strain DHC34 provides insights into its potential ecological strategies and evolutionary adaptations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPararobbsia
SpeciesPararobbsia silviterrae
Strainstrain DHC34

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pararobbsia silviterrae strain DHC34 scaffold43, whole genome

Gene Summary

Adenine Count

1181458 bp

Thymine Count

1193316 bp

Guanine Count

2156308 bp

Cytosine Count

2110670 bp

Genome Length

6642683 bp

Protein-coding Genes

5540 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-amino acid dehydrogenaseD7S86_05085Not AvailableNegative1127863 - 112915546277.6
winged helix-turn-helix transcriptional regulatorD7S86_05090Not AvailablePositive1129368 - 112985618749.2
pa0069 family radical sam proteinD7S86_05095Not AvailablePositive1130006 - 113120544198.9
tm2 domain-containing proteinD7S86_05100Not AvailableNegative1131319 - 113177416232.6
30s ribosomal protein s16D7S86_05105Not AvailablePositive1132286 - 11325439406.39
ribosome maturation factor rimmD7S86_05110Not AvailablePositive1132563 - 113325224012.1
trna (guanosine(37)-n1)-methyltransferase trmdD7S86_05115Not AvailablePositive1133191 - 113418635791.5
50s ribosomal protein l19D7S86_05120Not AvailablePositive1134173 - 113455314219.3
coa pyrophosphataseD7S86_05125Not AvailablePositive1134622 - 113530825145.9
cobd/cbib family proteinD7S86_05130Not AvailablePositive1135367 - 113630234386.9

Displaying genes 1151 – 1160 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.