Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter fastidiosus strain NSB1, designated as JCM 33896, is classified as a Gram-negative, non-motile, rod-shaped bacterium. This strain exhibits strict anaerobic growth, meaning it thrives in environments devoid of oxygen. It is noteworthy that Coprobacter fastidiosus is a non-spore-forming organism, indicating that it does not produce spores as a means of survival under adverse conditions. This strain is characterized by a single replicon, which is a distinct feature of its genetic organization. The accession number for this strain is RBXN00000000.1, providing a reference point for researchers interested in studying its genomic properties. The ecological role of Coprobacter fastidiosus, particularly in anaerobic environments such as the gastrointestinal tracts of animals, suggests its potential involvement in the digestion of complex organic materials. As a member of the gut microbiota, this bacterium may contribute to the breakdown of dietary fibers and the fermentation processes that produce short-chain fatty acids, which are beneficial for host health. Understanding the properties and interactions of Coprobacter fastidiosus can shed light on the complex dynamics of microbial communities in anaerobic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter fastidiosus
StrainNSB1 = JCM 33896 strain NSB1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1

Gene Summary

Adenine Count

1062793 bp

Thymine Count

1041029 bp

Guanine Count

642659 bp

Cytosine Count

665339 bp

Genome Length

3411820 bp

Protein-coding Genes

2670 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transferase family hexapeptide repeat proteinBC742_0607Not AvailableNegative730327 - 73115431217.4
o-antigen/teichoic acid export membrane proteinBC742_0608Not AvailableNegative731151 - 73259354863.2
endonuclease gBC742_0609Not AvailablePositive733014 - 73388933837.5
trna modification gtpase trmeBC742_0610Not AvailablePositive733903 - 73530951567.3
excisionase family dna binding proteinBC742_0611Not AvailablePositive735594 - 73646935248.5
site-specific recombinase xerdBC742_0612Not AvailablePositive736587 - 73770243857.8
concanavalin a-like lectin/glucanase superfamily proteinBC742_0613Not AvailableNegative738068 - 73942650352.1
hypothetical proteinBC742_0614Not AvailableNegative739764 - 7398864859.0
two component regulator with propeller domainBC742_0615Not AvailablePositive740101 - 744168155265.0
hypothetical proteinBC742_0616Not AvailableNegative744234 - 747077104127.0

Displaying genes 601 – 610 of 2733 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.