Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter fastidiosus strain NSB1, designated as JCM 33896, is classified as a Gram-negative, non-motile, rod-shaped bacterium. This strain exhibits strict anaerobic growth, meaning it thrives in environments devoid of oxygen. It is noteworthy that Coprobacter fastidiosus is a non-spore-forming organism, indicating that it does not produce spores as a means of survival under adverse conditions. This strain is characterized by a single replicon, which is a distinct feature of its genetic organization. The accession number for this strain is RBXN00000000.1, providing a reference point for researchers interested in studying its genomic properties. The ecological role of Coprobacter fastidiosus, particularly in anaerobic environments such as the gastrointestinal tracts of animals, suggests its potential involvement in the digestion of complex organic materials. As a member of the gut microbiota, this bacterium may contribute to the breakdown of dietary fibers and the fermentation processes that produce short-chain fatty acids, which are beneficial for host health. Understanding the properties and interactions of Coprobacter fastidiosus can shed light on the complex dynamics of microbial communities in anaerobic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter fastidiosus
StrainNSB1 = JCM 33896 strain NSB1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1

Gene Summary

Adenine Count

1062793 bp

Thymine Count

1041029 bp

Guanine Count

642659 bp

Cytosine Count

665339 bp

Genome Length

3411820 bp

Protein-coding Genes

2670 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formyltetrahydrofolate deformylaseBC742_0350Not AvailablePositive435210 - 43608533822.6
imidazole glycerol phosphate synthase subunit hishBC742_0351Not AvailablePositive436092 - 43668222438.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseBC742_0352Not AvailablePositive436696 - 43741526200.0
cyclaseBC742_0353Not AvailablePositive437424 - 43817927290.6
phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolaseBC742_0354Not AvailablePositive438189 - 43878522645.3
cell division transport system atp-binding proteinBC742_0355Not AvailablePositive438792 - 43946925372.0
aspartate kinaseBC742_0356Not AvailablePositive439579 - 44089548920.0
diaminopimelate decarboxylaseBC742_0357Not AvailablePositive441031 - 44218843271.0
allosteric nadp-dependent malic enzymeBC742_0358Not AvailableNegative442268 - 44455983826.3
tetr family transcriptional regulatorBC742_0359Not AvailablePositive444870 - 44548724098.9

Displaying genes 351 – 360 of 2733 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.