Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter fastidiosus strain NSB1, designated as JCM 33896, is classified as a Gram-negative, non-motile, rod-shaped bacterium. This strain exhibits strict anaerobic growth, meaning it thrives in environments devoid of oxygen. It is noteworthy that Coprobacter fastidiosus is a non-spore-forming organism, indicating that it does not produce spores as a means of survival under adverse conditions. This strain is characterized by a single replicon, which is a distinct feature of its genetic organization. The accession number for this strain is RBXN00000000.1, providing a reference point for researchers interested in studying its genomic properties. The ecological role of Coprobacter fastidiosus, particularly in anaerobic environments such as the gastrointestinal tracts of animals, suggests its potential involvement in the digestion of complex organic materials. As a member of the gut microbiota, this bacterium may contribute to the breakdown of dietary fibers and the fermentation processes that produce short-chain fatty acids, which are beneficial for host health. Understanding the properties and interactions of Coprobacter fastidiosus can shed light on the complex dynamics of microbial communities in anaerobic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter fastidiosus
StrainNSB1 = JCM 33896 strain NSB1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1

Gene Summary

Adenine Count

1062793 bp

Thymine Count

1041029 bp

Guanine Count

642659 bp

Cytosine Count

665339 bp

Genome Length

3411820 bp

Protein-coding Genes

2670 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system phosphate regulon sensor histidine kinase phorBC742_0118Not AvailableNegative149660 - 15122259832.0
translation elongation factor 2 (ef-2/ef-g)BC742_0119Not AvailableNegative151495 - 15365180519.5
oxygen-independent coproporphyrinogen-3 oxidaseBC742_0120Not AvailablePositive153834 - 15496142874.3
hypothetical proteinBC742_0121Not AvailablePositive155203 - 15610234804.6
putative acetyltransferaseBC742_0122Not AvailablePositive156115 - 15712838971.2
putative integral membrane protein (tigr00698 family)BC742_0123Not AvailableNegative157138 - 15807033695.6
prolipoprotein diacylglyceryl transferaseBC742_0124Not AvailableNegative158074 - 15893432935.7
diaminopimelate dehydrogenaseBC742_0125Not AvailableNegative159105 - 16000132542.5
atp-binding cassette subfamily f protein 3BC742_0126Not AvailablePositive160242 - 16187962078.5
secondary thiamine-phosphate synthase enzymeBC742_0127Not AvailablePositive161891 - 16230115561.7

Displaying genes 121 – 130 of 2733 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.