Thiocapsa rosea strain DSM 235

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiocapsa

Description

Thiocapsa rosea strain DSM 235 is an anaerobic bacterium characterized by its single replicon, which is indicative of its genetic structure. This strain is cataloged under the accessions RBXL00000000.1. As an anaerobic organism, Thiocapsa rosea thrives in environments devoid of oxygen, which significantly influences its metabolic processes and ecological interactions. The anaerobic requirement suggests that Thiocapsa rosea is adapted to specific ecological niches, such as sulfidic environments, where it can utilize alternative electron acceptors for respiration. This adaptation is essential for its survival and growth in environments where oxygen is present in low concentrations or absent altogether. Studying Thiocapsa rosea strain DSM 235 contributes to the understanding of microbial diversity and the ecological roles of anaerobic bacteria in biogeochemical cycles. Its unique traits may also provide insights into the microbial communities that thrive in extreme environments, underlining the importance of such organisms in maintaining ecological balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiocapsa
SpeciesThiocapsa rosea
Strainstrain DSM 235

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiocapsa rosea strain DSM 235
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiocapsa rosea strain DSM 235 Ga0242571_12, whole genome shotgun

Gene Summary

Adenine Count

1102357 bp

Thymine Count

1106215 bp

Guanine Count

1952040 bp

Cytosine Count

1951243 bp

Genome Length

6111855 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
small-conductance mechanosensitive channelBDD21_1169Not AvailableNegative1247015 - 124971499279.0
nadph-dependent 2,4-dienoyl-coa reductase/sulfur reductase-like enzymeBDD21_1170Not AvailablePositive1250172 - 125187560516.2
antitoxin yefmBDD21_1171Not AvailablePositive1251953 - 12522079557.3
toxin yoebBDD21_1172Not AvailablePositive1252204 - 125245810409.4
hypothetical proteinBDD21_1173Not AvailablePositive1252480 - 125278811697.9
uma2 family endonucleaseBDD21_1174Not AvailableNegative1252823 - 125340721780.6
uncharacterized protein (upf0332 family)BDD21_1175Not AvailableNegative1253537 - 125398916773.9
nucleotidyltransferase-like proteinBDD21_1176Not AvailableNegative1253968 - 125436014383.0
hae1 family hydrophobic/amphiphilic exporter-1/multidrug efflux pumpBDD21_1177Not AvailableNegative1254629 - 1257757112278.0
membrane fusion protein (multidrug efflux system)BDD21_1178Not AvailableNegative1257762 - 125887439715.5

Displaying genes 1151 – 1160 of 5357 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.