Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase | D6R52_00750 | Not Available | Negative | 128345 - 129484 | 41616.2 |
| histidine phosphatase family protein | D6R52_00755 | Not Available | Positive | 129792 - 130394 | 22295.8 |
| nucleoside triphosphatase nudi | D6R52_00760 | Not Available | Negative | 130433 - 130858 | 16371.6 |
| hypothetical protein | D6R52_00765 | Not Available | Positive | 131137 - 131679 | 18596.8 |
| competence/damage-inducible protein a | D6R52_00770 | Not Available | Positive | 131779 - 132981 | 44258.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 132704 - 132819 | Not Available |
| iclr family transcriptional regulator | D6R52_00775 | Not Available | Positive | 133201 - 133983 | 28932.9 |
| l-rhamnonate dehydratase | D6R52_00780 | Not Available | Positive | 133998 - 135203 | 44288.1 |
| mfs transporter | D6R52_00785 | Not Available | Positive | 135260 - 136549 | 46197.3 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | D6R52_00790 | Not Available | Positive | 136567 - 137370 | 28947.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




