Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | D6R52_04315 | Not Available | Positive | 851068 - 852153 | 40317.2 |
| bcct family transporter yeav | D6R52_04320 | Not Available | Positive | 852404 - 854014 | 58673.4 |
| ring-hydroxylating oxygenase subunit alpha | D6R52_04325 | Not Available | Positive | 854046 - 855170 | 42493.9 |
| oxidoreductase | D6R52_04330 | Not Available | Positive | 855226 - 856191 | 35715.2 |
| ribonuclease d | D6R52_04335 | Not Available | Negative | 856245 - 857372 | 42778.7 |
| long-chain-fatty-acid--coa ligase fadd | D6R52_04340 | Not Available | Negative | 857442 - 859127 | 62354.7 |
| slp family lipoprotein yeay | D6R52_04345 | Not Available | Negative | 859332 - 859913 | 20922.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | D6R52_04350 | Not Available | Negative | 859953 - 860648 | 25201.3 |
| atp-dependent dna helicase | D6R52_04355 | Not Available | Negative | 860706 - 862616 | 70365.9 |
| rida family protein | D6R52_04360 | Not Available | Positive | 862748 - 863092 | 12493.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




