Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf488 domain-containing protein | D6R52_04265 | Not Available | Positive | 846065 - 846412 | 13354.9 |
| duf333 domain-containing protein | D6R52_04270 | Not Available | Negative | 846434 - 846688 | 8942.87 |
| diguanylate cyclase | D6R52_04275 | Not Available | Positive | 846871 - 847896 | 38521.8 |
| hypothetical protein | D6R52_04280 | Not Available | Positive | 847929 - 848027 | 3458.45 |
| protein yoaj | D6R52_04285 | Not Available | Positive | 848030 - 848104 | 2691.57 |
| glsb/yeaq/ymge family stress response membrane protein | D6R52_04290 | Not Available | Negative | 848163 - 848411 | 8671.14 |
| duf1869 domain-containing protein | D6R52_04295 | Not Available | Negative | 848559 - 848741 | 6608.63 |
| duf1971 domain-containing protein | D6R52_04300 | Not Available | Negative | 848745 - 849104 | 13672.2 |
| leucine efflux protein | D6R52_04305 | Not Available | Negative | 849277 - 849915 | 23232.0 |
| lysr family transcriptional regulator | D6R52_04310 | Not Available | Negative | 850042 - 850965 | 34646.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




