Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine/pyridoxamine 5'-phosphate oxidase | D6R52_03495 | Not Available | Negative | 695795 - 696451 | 25546.6 |
| lysozyme inhibitor | D6R52_03500 | Not Available | Negative | 696510 - 696839 | 12568.2 |
| anhydro-n-acetylmuramic acid kinase | D6R52_03505 | Not Available | Negative | 696937 - 698046 | 39491.8 |
| outer membrane lipoprotein slyb | D6R52_03510 | Not Available | Positive | 698320 - 698787 | 15602.7 |
| slya family transcriptional regulator | D6R52_03515 | Not Available | Negative | 698834 - 699268 | 16354.0 |
| duf1656 domain-containing protein | D6R52_03520 | Not Available | Positive | 699469 - 699705 | 8891.33 |
| hlyd family secretion protein | D6R52_03525 | Not Available | Positive | 699708 - 700565 | 31526.6 |
| fusc family protein | D6R52_03530 | Not Available | Positive | 700565 - 702577 | 75271.0 |
| superoxide dismutase | D6R52_03535 | Not Available | Negative | 702578 - 703099 | 17682.0 |
| oxidoreductase | D6R52_03540 | Not Available | Negative | 703180 - 704076 | 33707.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




