Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | D6R52_03090 | Not Available | Negative | 616547 - 616672 | 4714.65 |
| hypothetical protein | D6R52_03100 | Not Available | Negative | 618084 - 618362 | 11347.4 |
| hypothetical protein | D6R52_03105 | Not Available | Negative | 618429 - 618680 | 9277.3 |
| type i toxin-antitoxin system hok family toxin | D6R52_03110 | Not Available | Negative | 618896 - 619108 | 7843.86 |
| hypothetical protein | D6R52_03115 | Not Available | Negative | 619267 - 619410 | 5135.07 |
| hypothetical protein | D6R52_03120 | Not Available | Negative | 619780 - 620760 | 37282.7 |
| integrase | D6R52_03125 | Not Available | Negative | 621120 - 621722 | 22735.7 |
| hypothetical protein | D6R52_03130 | Not Available | Positive | 622040 - 623389 | 52128.1 |
| giy-yig nuclease family protein | D6R52_03135 | Not Available | Positive | 623937 - 624881 | 37091.6 |
| duf977 family protein | D6R52_03140 | Not Available | Negative | 625011 - 625433 | 16369.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




