Escherichia coli strain NGCE-33

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain NGCE-33 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain demonstrates a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. The optimal growth temperature for NGCE-33 is 37.0°C, which aligns with the physiological temperature of many mammalian hosts, indicating its adaptation to a host-associated habitat. As a member of the diverse E. coli species, strain NGCE-33's ability to thrive in a host-associated environment suggests potential interactions with the host microbiome, contributing to nutrient cycling and metabolic processes. The facultative anaerobic trait further implies that NGCE-33 may play a role in various metabolic pathways, depending on the oxygen availability within its ecological niche. Understanding the specific interactions and metabolic contributions of NGCE-33 within its host environment could provide insights into its functional role in maintaining microbial diversity and stability in the gastrointestinal tract or other associated systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain NGCE-33
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain NGCE-33

Accession NumberRBWA00000000.1

Gene Summary

Adenine Count

1195292 bp

Thymine Count

1187071 bp

Guanine Count

1207922 bp

Cytosine Count

1226211 bp

Genome Length

4825635 bp

Protein-coding Genes

4440 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinD6R52_02120Not Available-432106 - 4323127891.64
yebc/pmpr family dna-binding transcriptional regulatorD6R52_02125Not Available-432526 - 43324225854.5
amp nucleosidaseD6R52_02130Not Available-433585 - 43503953997.9
shikimate transporterD6R52_02135Not Available-435141 - 43645747817.2
lipopolysaccharide heptosyltransferase family proteinD6R52_02140Not Available+436772 - 43782439481.4
dna-binding proteinD6R52_02160Not Available+444972 - 44585633209.2
hypothetical proteinD6R52_02165Not Available+446340 - 4465437053.69
Trna-asnNot AvailableNot Available+448675 - 448750Not Available
protein mtfaD6R52_02180Not Available-448851 - 44964830234.6
Trna-serNot AvailableNot Available+449742 - 449831Not Available

Displaying genes 551 – 560 of 4682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites