Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1-like element isec1 family transposase | D6R52_24225 | Not Available | Positive | 4799965 - 4800448 | 17971.5 |
| elongation factor tu | D6R52_24230 | Not Available | Negative | 4800449 - 4800909 | 16900.0 |
| isas1 family transposase | D6R52_24235 | Not Available | Positive | 4800910 - 4801368 | 17638.9 |
| hypothetical protein | D6R52_24245 | Not Available | Negative | 4801763 - 4802147 | 14272.4 |
| is1 family transposase | D6R52_24250 | Not Available | Negative | 4802152 - 4802530 | 14916.1 |
| hypothetical protein | D6R52_24260 | Not Available | Negative | 4802987 - 4803265 | 10609.1 |
| duf3387 domain-containing protein | D6R52_24265 | Not Available | Positive | 4803266 - 4803604 | 12644.8 |
| rhs repeat protein | D6R52_24285 | Not Available | Positive | 4804550 - 4804853 | 11392.5 |
| duf3387 domain-containing protein | D6R52_24310 | Not Available | Negative | 4805725 - 4805997 | 9869.72 |
| is4 family transposase | D6R52_24315 | Not Available | Positive | 4805998 - 4806267 | 10302.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




