Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGCE-33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1195292 bp
Thymine Count
1187071 bp
Guanine Count
1207922 bp
Cytosine Count
1226211 bp
Genome Length
4825635 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
226 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction endonuclease subunit r | D6R52_24045 | Not Available | Positive | 4784893 - 4785923 | 38692.4 |
| is1 family transposase | D6R52_24050 | Not Available | Negative | 4785924 - 4785994 | 2454.95 |
| regulator | D6R52_24060 | Not Available | Negative | 4786620 - 4786954 | 12579.5 |
| is6 family transposase | D6R52_24075 | Not Available | Negative | 4787726 - 4787919 | 7055.81 |
| hemolysin activation protein | D6R52_24090 | Not Available | Negative | 4789730 - 4789870 | 5333.35 |
| is6 family transposase | D6R52_24105 | Not Available | Negative | 4790366 - 4791003 | 25446.9 |
| glutamate decarboxylase | D6R52_24110 | Not Available | Positive | 4791067 - 4791761 | 25798.0 |
| Trna-ala | Not Available | Not Available | Positive | 4792046 - 4792121 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4792164 - 4792240 | Not Available |
| rhs repeat protein | D6R52_24135 | Not Available | Positive | 4792422 - 4793048 | 23614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




